DLITE
latest

Contents:

  • Overview and install
  • Usage
    • Generate_Voronoi_data.ipynb
    • Demo_notebook_SurfaceEvolver.ipynb
    • Demo_notebook_ZO-1.ipynb
    • Compare_CELLFIT_DLITE.ipynb
    • FOV_drift.ipynb
  • Example
    • A minimal example of how to use DLITE
      • A bit about the data structure
  • Physics
    • Tension balance
    • Pressure balance
  • Synthetic Data
    • Generate Voronoi colony mesh
    • Converting a colony mesh to a mesh suitable for use with SurfaceEvolver
    • Convert SurfaceEvolver mesh to force network
    • Compare imputed force network between CellFIT and DLITE
    • Simulate FOV drift in a single colony
  • ZO-1 Data
    • ZO-1 mesh to force network
  • Package modules
    • DLITE package
      • Submodules
      • DLITE.AICS_data module
      • DLITE.Lloyd_relaxation_class module
      • DLITE.ManualTracing module
      • DLITE.ManualTracingMultiple module
      • DLITE.PlottingFunctions module
      • DLITE.SaveSurfEvolFile module
      • DLITE.SurfaceEvolver module
      • DLITE.cell_describe module
      • Module contents
  • Credits
    • Development Lead
    • Contributors
DLITE
  • Docs »
  • Overview: module code

All modules for which code is available

  • DLITE
    • DLITE.AICS_data
    • DLITE.Lloyd_relaxation_class
    • DLITE.ManualTracing
    • DLITE.ManualTracingMultiple
    • DLITE.PlottingFunctions
    • DLITE.SaveSurfEvolFile
    • DLITE.SurfaceEvolver
    • DLITE.cell_describe

© Copyright 2019, Ritvik Vasan Revision 8b686d5e.

Built with Sphinx using a theme provided by Read the Docs.